Add Node Expansion and Pruning Features
This commit is contained in:
@@ -1,8 +1,10 @@
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import Graph, { DirectedGraph } from 'graphology'
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import { useCallback, useEffect, useRef } from 'react'
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import { useTranslation } from 'react-i18next'
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import { randomColor, errorMessage } from '@/lib/utils'
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import * as Constants from '@/lib/constants'
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import { useGraphStore, RawGraph } from '@/stores/graph'
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import { useGraphStore, RawGraph, RawNodeType, RawEdgeType } from '@/stores/graph'
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import { toast } from 'sonner'
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import { queryGraphs } from '@/api/lightrag'
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import { useBackendState } from '@/stores/state'
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import { useSettingsStore } from '@/stores/settings'
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@@ -172,12 +174,15 @@ const createSigmaGraph = (rawGraph: RawGraph | null) => {
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}
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const useLightrangeGraph = () => {
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const { t } = useTranslation()
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const queryLabel = useSettingsStore.use.queryLabel()
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const rawGraph = useGraphStore.use.rawGraph()
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const sigmaGraph = useGraphStore.use.sigmaGraph()
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const maxQueryDepth = useSettingsStore.use.graphQueryMaxDepth()
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const minDegree = useSettingsStore.use.graphMinDegree()
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const isFetching = useGraphStore.use.isFetching()
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const nodeToExpand = useGraphStore.use.nodeToExpand()
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const nodeToPrune = useGraphStore.use.nodeToPrune()
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// Get tab visibility
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const { isTabVisible } = useTabVisibility()
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@@ -327,6 +332,382 @@ const useLightrangeGraph = () => {
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}
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}, [isGraphTabVisible, rawGraph])
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// Handle node expansion
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useEffect(() => {
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const handleNodeExpand = async (nodeId: string | null) => {
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if (!nodeId || !sigmaGraph || !rawGraph) return;
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try {
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// Set fetching state
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useGraphStore.getState().setIsFetching(true);
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// Get the node to expand
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const nodeToExpand = rawGraph.getNode(nodeId);
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if (!nodeToExpand) {
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console.error('Node not found:', nodeId);
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useGraphStore.getState().setIsFetching(false);
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return;
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}
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// Get the label of the node to expand
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const label = nodeToExpand.labels[0];
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if (!label) {
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console.error('Node has no label:', nodeId);
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useGraphStore.getState().setIsFetching(false);
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return;
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}
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// Fetch the extended subgraph with depth 2
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const extendedGraph = await queryGraphs(label, 2, 0);
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if (!extendedGraph || !extendedGraph.nodes || !extendedGraph.edges) {
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console.error('Failed to fetch extended graph');
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useGraphStore.getState().setIsFetching(false);
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return;
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}
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// Process nodes to add required properties for RawNodeType
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const processedNodes: RawNodeType[] = [];
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for (const node of extendedGraph.nodes) {
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// Generate random color values
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const r = Math.floor(Math.random() * 256);
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const g = Math.floor(Math.random() * 256);
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const b = Math.floor(Math.random() * 256);
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const color = `rgb(${r}, ${g}, ${b})`;
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// Create a properly typed RawNodeType
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processedNodes.push({
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id: node.id,
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labels: node.labels,
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properties: node.properties,
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size: 10, // Default size
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x: Math.random(), // Random position
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y: Math.random(), // Random position
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color: color, // Random color
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degree: 0 // Initial degree
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});
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}
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// Process edges to add required properties for RawEdgeType
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const processedEdges: RawEdgeType[] = [];
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for (const edge of extendedGraph.edges) {
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// Create a properly typed RawEdgeType
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processedEdges.push({
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id: edge.id,
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source: edge.source,
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target: edge.target,
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type: edge.type,
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properties: edge.properties,
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dynamicId: '' // Will be set when adding to sigma graph
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});
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}
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// Store current node positions
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const nodePositions: Record<string, {x: number, y: number}> = {};
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sigmaGraph.forEachNode((node) => {
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nodePositions[node] = {
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x: sigmaGraph.getNodeAttribute(node, 'x'),
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y: sigmaGraph.getNodeAttribute(node, 'y')
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};
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});
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// Get existing node IDs
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const existingNodeIds = new Set(sigmaGraph.nodes());
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// Check if there are any new nodes that can be connected to the selected node
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let hasConnectableNewNodes = false;
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for (const newNode of processedNodes) {
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// Skip if node already exists
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if (existingNodeIds.has(newNode.id)) {
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continue;
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}
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// Check if this node is connected to the selected node
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const isConnected = processedEdges.some(
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edge => (edge.source === nodeId && edge.target === newNode.id) ||
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(edge.target === nodeId && edge.source === newNode.id)
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);
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if (isConnected) {
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hasConnectableNewNodes = true;
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break;
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}
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}
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// If no new connectable nodes found, show toast and return
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if (!hasConnectableNewNodes) {
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toast.info(t('graphPanel.propertiesView.node.noNewNodes'));
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useGraphStore.getState().setIsFetching(false);
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return;
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}
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// Get degree range from existing graph for size calculations
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let minDegree = Number.MAX_SAFE_INTEGER;
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let maxDegree = 0;
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sigmaGraph.forEachNode(node => {
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const degree = sigmaGraph.degree(node);
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minDegree = Math.min(minDegree, degree);
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maxDegree = Math.max(maxDegree, degree);
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});
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// Calculate size formula parameters
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const range = maxDegree - minDegree || 1; // Avoid division by zero
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const scale = Constants.maxNodeSize - Constants.minNodeSize;
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// Add new nodes from the processed nodes
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for (const newNode of processedNodes) {
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// Skip if node already exists
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if (existingNodeIds.has(newNode.id)) {
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continue;
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}
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// Check if this node is connected to the selected node
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const isConnected = processedEdges.some(
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edge => (edge.source === nodeId && edge.target === newNode.id) ||
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(edge.target === nodeId && edge.source === newNode.id)
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);
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if (isConnected) {
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// Calculate node degree (number of connected edges)
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const nodeDegree = processedEdges.filter(edge =>
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edge.source === newNode.id || edge.target === newNode.id
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).length;
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// Calculate node size using the same formula as in fetchGraph
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const nodeSize = Math.round(
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Constants.minNodeSize + scale * Math.pow((nodeDegree - minDegree) / range, 0.5)
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);
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// Add the new node to the graph with calculated size
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sigmaGraph.addNode(newNode.id, {
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label: newNode.labels.join(', '),
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color: newNode.color,
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x: nodePositions[nodeId].x + (Math.random() - 0.5) * 0.5,
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y: nodePositions[nodeId].y + (Math.random() - 0.5) * 0.5,
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size: nodeSize,
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borderColor: '#000',
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borderSize: 0.2
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});
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// Add the node to the raw graph
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if (!rawGraph.getNode(newNode.id)) {
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// Update the node size to match the calculated size
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newNode.size = nodeSize;
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// Add to nodes array
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rawGraph.nodes.push(newNode);
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// Update nodeIdMap
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rawGraph.nodeIdMap[newNode.id] = rawGraph.nodes.length - 1;
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}
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}
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}
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// Add new edges
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for (const newEdge of processedEdges) {
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// Only add edges where both source and target exist in the graph
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if (sigmaGraph.hasNode(newEdge.source) && sigmaGraph.hasNode(newEdge.target)) {
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// Skip if edge already exists
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if (sigmaGraph.hasEdge(newEdge.source, newEdge.target)) {
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continue;
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}
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// Add the edge to the sigma graph
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newEdge.dynamicId = sigmaGraph.addDirectedEdge(newEdge.source, newEdge.target, {
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label: newEdge.type || undefined
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});
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// Add the edge to the raw graph
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if (!rawGraph.getEdge(newEdge.id, false)) {
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// Add to edges array
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rawGraph.edges.push(newEdge);
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// Update edgeIdMap
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rawGraph.edgeIdMap[newEdge.id] = rawGraph.edges.length - 1;
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// Update dynamic edge map
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rawGraph.edgeDynamicIdMap[newEdge.dynamicId] = rawGraph.edges.length - 1;
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}
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}
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}
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// Update the dynamic edge map
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rawGraph.buildDynamicMap();
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// Restore positions for existing nodes
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Object.entries(nodePositions).forEach(([id, position]) => {
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if (sigmaGraph.hasNode(id)) {
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sigmaGraph.setNodeAttribute(id, 'x', position.x);
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sigmaGraph.setNodeAttribute(id, 'y', position.y);
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}
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});
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// Update the size of the expanded node based on its new edge count
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if (sigmaGraph.hasNode(nodeId)) {
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// Get the new degree of the expanded node
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const expandedNodeDegree = sigmaGraph.degree(nodeId);
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// Calculate new size for the expanded node using the same parameters
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const newSize = Math.round(
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Constants.minNodeSize + scale * Math.pow((expandedNodeDegree - minDegree) / range, 0.5)
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);
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// Update the size in sigma graph
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sigmaGraph.setNodeAttribute(nodeId, 'size', newSize);
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// Update the size in raw graph
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const expandedNodeIndex = rawGraph.nodeIdMap[nodeId];
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if (expandedNodeIndex !== undefined) {
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rawGraph.nodes[expandedNodeIndex].size = newSize;
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}
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}
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// Refresh the layout and store the node ID to reselect after refresh
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const nodeIdToSelect = nodeId;
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useGraphStore.getState().refreshLayout();
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// Use setTimeout to reselect the node after the layout refresh is complete
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setTimeout(() => {
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if (nodeIdToSelect) {
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useGraphStore.getState().setSelectedNode(nodeIdToSelect, true);
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}
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}, 2000); // Wait a bit longer than the refreshLayout timeout (which is 10ms)
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} catch (error) {
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console.error('Error expanding node:', error);
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} finally {
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// Reset fetching state and node to expand
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useGraphStore.getState().setIsFetching(false);
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}
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};
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// If there's a node to expand, handle it
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if (nodeToExpand) {
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handleNodeExpand(nodeToExpand);
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// Reset the nodeToExpand state after handling
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window.setTimeout(() => {
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useGraphStore.getState().triggerNodeExpand(null);
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}, 0);
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}
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}, [nodeToExpand, sigmaGraph, rawGraph]);
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// Helper function to get all nodes that will be deleted
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const getNodesThatWillBeDeleted = useCallback((nodeId: string, graph: DirectedGraph) => {
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const nodesToDelete = new Set<string>([nodeId]);
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// Find all nodes that would become isolated after deletion
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graph.forEachNode((node) => {
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if (node === nodeId) return; // Skip the node being deleted
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// Get all neighbors of this node
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const neighbors = graph.neighbors(node);
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// If this node has only one neighbor and that neighbor is the node being deleted,
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// this node will become isolated, so we should delete it too
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if (neighbors.length === 1 && neighbors[0] === nodeId) {
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nodesToDelete.add(node);
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}
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});
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return nodesToDelete;
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}, []);
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// Handle node pruning
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useEffect(() => {
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const handleNodePrune = (nodeId: string | null) => {
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if (!nodeId || !sigmaGraph || !rawGraph) return;
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try {
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// Check if the node exists
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if (!sigmaGraph.hasNode(nodeId)) {
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console.error('Node not found:', nodeId);
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return;
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}
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// Get all nodes that will be deleted (including isolated nodes)
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const nodesToDelete = getNodesThatWillBeDeleted(nodeId, sigmaGraph);
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// Check if we would delete all nodes in the graph
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if (nodesToDelete.size === sigmaGraph.nodes().length) {
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toast.error(t('graphPanel.propertiesView.node.deleteAllNodesError'));
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return;
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}
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// If the node is selected or focused, clear selection
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const state = useGraphStore.getState();
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if (state.selectedNode === nodeId || state.focusedNode === nodeId) {
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state.clearSelection();
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}
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// Process all nodes that need to be deleted
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for (const nodeToDelete of nodesToDelete) {
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// Remove the node from the sigma graph (this will also remove connected edges)
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sigmaGraph.dropNode(nodeToDelete);
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// Remove the node from the raw graph
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const nodeIndex = rawGraph.nodeIdMap[nodeToDelete];
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if (nodeIndex !== undefined) {
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// Find all edges connected to this node
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const edgesToRemove = rawGraph.edges.filter(
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edge => edge.source === nodeToDelete || edge.target === nodeToDelete
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);
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// Remove edges from raw graph
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for (const edge of edgesToRemove) {
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const edgeIndex = rawGraph.edgeIdMap[edge.id];
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if (edgeIndex !== undefined) {
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// Remove from edges array
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rawGraph.edges.splice(edgeIndex, 1);
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// Update edgeIdMap for all edges after this one
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for (const [id, idx] of Object.entries(rawGraph.edgeIdMap)) {
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if (idx > edgeIndex) {
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rawGraph.edgeIdMap[id] = idx - 1;
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}
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}
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// Remove from edgeIdMap
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delete rawGraph.edgeIdMap[edge.id];
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// Remove from edgeDynamicIdMap
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delete rawGraph.edgeDynamicIdMap[edge.dynamicId];
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}
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}
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// Remove node from nodes array
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rawGraph.nodes.splice(nodeIndex, 1);
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// Update nodeIdMap for all nodes after this one
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for (const [id, idx] of Object.entries(rawGraph.nodeIdMap)) {
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if (idx > nodeIndex) {
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rawGraph.nodeIdMap[id] = idx - 1;
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}
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}
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// Remove from nodeIdMap
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delete rawGraph.nodeIdMap[nodeToDelete];
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}
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}
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// Rebuild the dynamic edge map
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rawGraph.buildDynamicMap();
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// Show notification if we deleted more than just the selected node
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if (nodesToDelete.size > 1) {
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toast.info(t('graphPanel.propertiesView.node.nodesRemoved', { count: nodesToDelete.size }));
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}
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// Force a refresh of the graph layout
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useGraphStore.getState().refreshLayout();
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} catch (error) {
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console.error('Error pruning node:', error);
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}
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};
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// If there's a node to prune, handle it
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if (nodeToPrune) {
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handleNodePrune(nodeToPrune);
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// Reset the nodeToPrune state after handling
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window.setTimeout(() => {
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useGraphStore.getState().triggerNodePrune(null);
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}, 0);
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}
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}, [nodeToPrune, sigmaGraph, rawGraph, getNodesThatWillBeDeleted, t]);
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const lightrageGraph = useCallback(() => {
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// If we already have a graph instance, return it
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if (sigmaGraph) {
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